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pgd_standard

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pgd_standard [2011/07/07 16:07] – created heidipgd_standard [2011/10/11 15:50] (current) – heidi
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 ====== PGD file examples ====== ====== PGD file examples ======
-Data of two loci with Standard data type from four diploid populations : +Data of two loci with Standard data type from four diploid populations: 
 <code> <code>
 <?xml version="1.0" encoding="iso-8859-1"?> <?xml version="1.0" encoding="iso-8859-1"?>
-<?xml-stylesheet type="text/xsl" href="stylesheet_PGD.xsl"?> 
  
-<PGD>+<PGD xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="PGD_schema.xsd">
  
   <header title="Fake HLA data">   <header title="Fake HLA data">
     <numPop> 4 </numPop>     <numPop> 4 </numPop>
     <ploidy> 2 </ploidy>         <ploidy> 2 </ploidy>    
-    <aligned> yes </aligned> 
     <missing> ? </missing>     <missing> ? </missing>
     <gap> - </gap>     <gap> - </gap>
Line 159: Line 157:
              0, 9, 8, 7, 6, 5, 5, 3, 2, 0              0, 9, 8, 7, 6, 5, 5, 3, 2, 0
              9, 8, 7, 6, 5, 4, 3, 5, 3, 2, 0              9, 8, 7, 6, 5, 4, 3, 5, 3, 2, 0
 +             5, 6, 7, 8, 9, 1, 2, 3, 5, 3, 2, 0
     </matrix>     </matrix>
   </distanceMatrix>   </distanceMatrix>
pgd_standard.1310047677.txt.gz · Last modified: 2011/07/07 16:07 by heidi