lamarc
Differences
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| lamarc [2007/12/13 17:07] – heidi | lamarc [2008/07/22 13:31] (current) – external edit 127.0.0.1 | ||
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| * Microsatellites | * Microsatellites | ||
| * electrophoretic data | * electrophoretic data | ||
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| * Upper- and lowercase nucleotide symbols are treated equivalently | * Upper- and lowercase nucleotide symbols are treated equivalently | ||
| * Deletions should be coded as unknown and will be treated as unknown | * Deletions should be coded as unknown and will be treated as unknown | ||
| + | * Microsatellite data are coded as the number of repeats, with "?" | ||
| - | **example** (minimal DNA data block describing a single region, a single segment, a single population, and two individuals with a single haplotype each. Note that while the two blocks of data are differently formatted, they contain the same number of bases; this is required since all blocks corresponding to a single segment | + | **examples:** |
| - | < | + | * minimal DNA data block describing a single region, a single segment, a single population, and two individuals with a single haplotype each. Note that while the two blocks of data are differently formatted, they contain the same number of bases; this is required since all blocks corresponding to a single segment: < |
| - | < | + | < |
| <region name=" | <region name=" | ||
| < | < | ||
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| </ | </ | ||
| </ | </ | ||
| + | * a microsatellite data block which also illustrates the use of multiple samples per individual. In this example, " | ||
| + | < | ||
| + | <region name=" | ||
| + | < | ||
| + | < | ||
| + | < | ||
| + | < | ||
| + | 7 8 14 7 9 21 | ||
| + | </ | ||
| + | </ | ||
| + | < | ||
| + | < | ||
| + | 7 9 14 7 9 21 | ||
| + | </ | ||
| + | </ | ||
| + | </ | ||
| + | < | ||
| + | < | ||
| + | < | ||
| + | 7 9 14 7 10 23 | ||
| + | </ | ||
| + | </ | ||
| + | < | ||
| + | < | ||
| + | 8 9 13 7 ? 23 | ||
| + | </ | ||
| + | </ | ||
| + | </ | ||
| + | </ | ||
| + | </ | ||
| + | </ | ||
| + | </ | ||
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lamarc.1197562074.txt.gz · Last modified: 2008/07/22 13:30 (external edit)