genepop
Differences
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| genepop [2007/12/05 11:54] – heidi | genepop [2011/07/07 11:29] (current) – heidi | ||
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| - | Genepop 4.0 (released 2007)\\ | + | Genepop 4.1 (24.03.2011)\\ |
| It computes exact tests for Hardy-Weinberg equilibrium, | It computes exact tests for Hardy-Weinberg equilibrium, | ||
| It computes estimates of F-statistics, | It computes estimates of F-statistics, | ||
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| ===== Program information ===== | ===== Program information ===== | ||
| * Windows | * Windows | ||
| - | * Unix or Linux | + | * Linux |
| * Mac OSX | * Mac OSX | ||
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| * haploid/ | * haploid/ | ||
| * Microsattelite | * Microsattelite | ||
| - | * multi-allelic markers | + | * Standard (multi-allelic markers) |
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| ===== Input Files ===== | ===== Input Files ===== | ||
| - | * **First line:** anything Use this line to store information about your data | + | |
| * **Locus names:** They may be given one per line, or on the same line but separated by commas. This could be useful to clearly label each column | * **Locus names:** They may be given one per line, or on the same line but separated by commas. This could be useful to clearly label each column | ||
| < | < | ||
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| This example shows some useful features: | This example shows some useful features: | ||
| * There is no constraint on the number of blanks separating the various fields | * There is no constraint on the number of blanks separating the various fields | ||
| - | * The individual | + | * The individual |
| * Alleles are numbered from 01 to 99 or 001 to 999 if needed. 2-digits and 3-digits coding of alleles can be intermixed (among loci, not within loci!) | * Alleles are numbered from 01 to 99 or 001 to 999 if needed. 2-digits and 3-digits coding of alleles can be intermixed (among loci, not within loci!) | ||
| * To designate alleles, consecutive numbers are not required | * To designate alleles, consecutive numbers are not required | ||
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| ===== How to cite ===== | ===== How to cite ===== | ||
| - | Raymond M. & Rousset F, 1995. GENEPOP | + | Rousset F, 2008. GENEPOP'007: a complete re-implementation of the genepop |
genepop.1196852070.txt.gz · Last modified: 2008/07/22 13:30 (external edit)