Differences

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--- 14.12.2007 [2007/12/14 11:43] – created heidi
+++ 14.12.2007 [2008/07/22 13:31] (current) – external edit 127.0.0.1
@@ Line 6: / Line 6: @@
       * header: Name, Population, number of loci, history of loci (IDs), (loci information), no of individuals/sequences, interleaved data,...
       * data: in a table like form with IDs, Frequency, Data (<ID>...</ID> <Freq>...</Freq> <Genot>...</Genot>)
-  * also look at different databases:
+  * also look at different databases/formats:
-    * ENSEMBL
+    * ENSEMBL (in [[FASTA]] format)
-    * HapMap
+    * HapMap: [[http://www.hapmap.org/downloads/encode1.html.en|HapMap:ENCODE Data]]
     * HGDP
     * ENCODE (resequencing HapMap)
+    * [[http://jhered.oxfordjournals.org/cgi/content/full/95/1/85|A Prototype Object Database for Mitochondrial DNA Variation -- Neigel and Leberg 95 (1): 85 -- Journal of Heredity]]
+    * [[http://bioinformatics.oxfordjournals.org/cgi/reprint/20/suppl_1/i152|TraitMap: an XML-based genetic-map database combining multigenic loci and biomolecular networks -- Heida et al. 20 (Supplement 1): i152 -- Bioinformatics]]
+    * [[http://books.nap.edu/openbook.php?record_id=11902&page=85|The New Science of Metagenomics: Revealing the Secrets of Our Microbial Planet]]
+    * [[SOLEXA]]: information on how solexa data are handled and concatenated
+    * [[FASTA]] (It seems also that the FASTA format is pretty well spread and it would be worth having a look at)
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