structure
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structure [2007/12/11 09:48] – heidi | structure [2011/07/07 12:54] (current) – heidi | ||
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====== STRUCTURE ====== | ====== STRUCTURE ====== | ||
- | {{structure.jpg? | + | {{structure.jpg? |
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- | Version 2.2 (April | + | Version 2.3.3 (January 2010)\\ |
- | The program structure implements a model-based clustering method for inferring population structure using genotype data consisting of unlinked markers. | + | The program structure implements a model-based clustering method for inferring population structure using genotype data consisting of unlinked markers. |
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* Windows | * Windows | ||
* Mac OS X | * Mac OS X | ||
+ | |||
===== Data type handled ===== | ===== Data type handled ===== | ||
- | * SNP | + | * SNP (numeric) |
* Microsatellites | * Microsatellites | ||
* RFLP | * RFLP | ||
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Carsten | Carsten | ||
</ | </ | ||
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===== How to cite ===== | ===== How to cite ===== | ||
The basic algorithm :\\ | The basic algorithm :\\ | ||
- | Pritchard, J. K., Stephens, M., and Donnelly, P. (2000a). Inference of population structure using | + | * Pritchard, J. K., Stephens, M., and Donnelly, P. (2000a). Inference of population structure using multilocus genotype data. Genetics, 155:945-959. |
- | multilocus genotype data. Genetics, 155:945{959. | + | |
\\ | \\ | ||
Extensions to the method:\\ | Extensions to the method:\\ | ||
- | Falush, D., Stephens, M., and Pritchard, J. K. (2003a). Inference of population structure: | + | * Falush, D., Stephens, M., and Pritchard, J. K. (2003a). Inference of population structure: |
- | sions to linked loci and correlated allele frequencies. Genetics, 164:1567{1587.\\ | + | |
- | and\\ | + | * Hubisz M. J., et al. (2009). Inferring weak population structure with the assistance of sample group information. Molecular Ecology Resources, 9:1322-32. |
- | Falush, D., Stephens, M., and Pritchard, J. K. (2007). Inference of population structure using | + | |
- | multilocus genotype data: dominant markers and null alleles. Molecular Ecology Notes. | + |
structure.1197362895.txt.gz · Last modified: 2008/07/22 13:30 (external edit)