User Tools

Site Tools


im

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision
Previous revision
im [2011/07/07 11:39] heidiim [2011/07/14 14:26] (current) heidi
Line 2: Line 2:
 {{im.jpg?220}}\\ {{im.jpg?220}}\\
  
-**[[http://lifesci.rutgers.edu/~heylab/HeylabSoftware.htm#IM|IM]]**\\ +**[[http://genfaculty.rutgers.edu/hey/software#IMa2|IM]]**\\ 
-[[http://lifesci.rutgers.edu/~heylab/ProgramsandData/Programs/IM/Using_IM_3_5_2007.pdf|documentation]]+[[http://lifesci.rutgers.edu/~heylab/ProgramsandData/Programs/IM/Introduction_to_IM_and_IMa_3_5_2007.pdf|documentation]]
  
 \\ \\
Line 18: Line 18:
   * dos/windows   * dos/windows
   * Mac   * Mac
 +
  
  
Line 24: Line 25:
   * DNA   * DNA
   * Microsatellites (STR)   * Microsatellites (STR)
-  * linked SNP (Sequence) and STR 
  
  
Line 53: Line 53:
   * Additional lines for additional loci - If there is more than one locus, then the data for locus 2 begins on line (n1+n2+5) with a line similar to line 4 presenting the basic information for locus 2. The sample names and sample sizes for locus 2 and the inheritance scalars and mutation model for locus 2 need not be the same as for locus 1   * Additional lines for additional loci - If there is more than one locus, then the data for locus 2 begins on line (n1+n2+5) with a line similar to line 4 presenting the basic information for locus 2. The sample names and sample sizes for locus 2 and the inheritance scalars and mutation model for locus 2 need not be the same as for locus 1
   * last line - should end with a newline so that the file ends on a blank line   * last line - should end with a newline so that the file ends on a blank line
 +
  
  
Line 78: Line 79:
  
  
 +===== How to cite ===== 
 +  * Nielsen R. and Wakeley J. (2001). Distinguishing migration from isolation: a Markov chain Monte Carlo approach. Genetics, 158(2):885-96. 
 +  * Hey J. and Nielsen R. (2007). Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics. Proc Natl Acad Sci USA, 104(8):2785-90.
im.1310031552.txt.gz · Last modified: 2011/07/07 11:39 by heidi