Differences
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| Both sides previous revisionPrevious revisionNext revision | Previous revision |
| hapmap [2008/01/15 16:25] – heidi | hapmap [2008/07/22 13:31] (current) – external edit 127.0.0.1 |
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| * The header of Hapmap format files looks like: ''rs#SNPalleleschromposstrand genome_build centerprotLSID assayLSIDpanelLSIDQC_code'' followed by a list of sample identifiers. | * The header of Hapmap format files looks like: ''rs#SNPalleleschromposstrand genome_build centerprotLSID assayLSIDpanelLSIDQC_code'' followed by a list of sample identifiers. |
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| * a sample line of the hapmap format genotype file: | * a sample line of the hapmap format genotype file: <code> |
| <code> | |
| rs169757 A/C Chr21 9928594 + ncbi_b35.1 broad urn:LSID:affymetrix.hapmap.org:Protocol:genotype_protocol_1:1 urn:LSID:affymetrix.hapmap.org:Assay:1612756:1 urn:lsid:dcc.hapmap.org:Panel:CEPH-30-trios:1 QC+ AC AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AC AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AC AA AC AA AA AA AA AA AA AA AA AC AA AA AC AC AA AA AA AA AA AA AA AA | rs169757 A/C Chr21 9928594 + ncbi_b35.1 broad urn:LSID:affymetrix.hapmap.org:Protocol:genotype_protocol_1:1 urn:LSID:affymetrix.hapmap.org:Assay:1612756:1 urn:lsid:dcc.hapmap.org:Panel:CEPH-30-trios:1 QC+ AC AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AC AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AA AC AA AC AA AA AA AA AA AA AA AA AC AA AA AC AC AA AA AA AA AA AA AA AA |
| </code> | </code> |
