geste_bayescan
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- | **BayeScan:** This program identifies candidate loci under natural selection. It's applicable to both, dominant and codominant data. | + | **BayeScan** |
+ | This program identifies candidate loci under natural selection. It's applicable to both, dominant and codominant data. | ||
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- | **GESTE** (version 2.0): (GEnetic STructure inference based on genetic and Environmental data) is a Bayesian method to evaluate the effect that biotic and abiotic environmental factors (geographic distance, language, temperature, | + | **GESTE** (version 2.0): \\ |
+ | (GEnetic STructure inference based on genetic and Environmental data) is a Bayesian method to evaluate the effect that biotic and abiotic environmental factors (geographic distance, language, temperature, | ||
GESTE estimates FST values for each local population and relates them to environmental factors using a generalized linear model. The method requires genetic data from codominant markers (e.g. allozymes, microsatellites, | GESTE estimates FST values for each local population and relates them to environmental factors using a generalized linear model. The method requires genetic data from codominant markers (e.g. allozymes, microsatellites, | ||
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===== How to cite ===== | ===== How to cite ===== | ||
- | * **BayeScan: | + | * **BayeScan: |
+ | | ||
+ | * Foll M, Fischer MC, Heckel G and L Excoffier (2010) Estimating population structure from AFLP amplification intensity. Molecular Ecology 19: 4638-4647 | ||
+ | * Fischer MC, Foll M, Excoffier L and G Heckel (2011) Enhanced AFLP genome scans detect local adaptation in high-altitude populations of a small rodent (Microtus arvalis). Molecular Ecology. | ||
* **GESTE:** Foll, M., and O.E. Gaggiotti, 2006. Identifying the environmental factors that determine the genetic structure of Populations. Genetics 174: 875-891. | * **GESTE:** Foll, M., and O.E. Gaggiotti, 2006. Identifying the environmental factors that determine the genetic structure of Populations. Genetics 174: 875-891. | ||
geste_bayescan.1307698510.txt.gz · Last modified: 2011/06/10 11:35 by heidi