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fastq

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FASTQ

wikipedia: FASTQ format
http://nar.oxfordjournals.org/content/early/2009/12/16/nar.gkp1137.full


FASTQ format is a text-based format for storing both a biological sequence (usually nucleotide sequence) and its corresponding quality scores. Both the sequence letter and quality score are encoded with a single ASCII character for brevity. It was originally developed at the Wellcome Trust Sanger Institute to bundle a FASTA sequence and its quality data, but has recently become the de facto standard for storing the output of high throughput sequencing instruments such as the Illumina Genome Analyzer

format information

  • text based
  • no standard file extension

Data type handled

  • nucleic acid sequences

file format


fastq.1315227916.txt.gz · Last modified: 2011/09/05 15:05 by heidi