NewHybrids version 1.1 beta (7. April 2003)
NewHybrids is a program for computing the posterior distribution that individuals in a sample fall into different hybrid categories.
NumIndivs
number of individualsNumLoci
number of lociDigits
number of digits used to denote a particular alleleFormat
Lumped
(genotype at a single locus is given by a single number) or NonLumped
LocusNames
names of all loci separated by whitespace Lumped
format: two alleles are encoded as one number, Digits
specify how many digits are used to represent each locusNonLumped
format: alleles at each locus are given by a consecutive pair of numbers that are white space seperatedLumped
: encoded as 0
, NonLumped
: encoded as -1
(each allele at the missing locus must have a -1
)
Lumped
format+
band is present-
band is absent0
missing data
Lumped
data file:NumIndivs 2 NumLoci 6 Digits 1 Format Lumped LocusNames sAAT1 sAAT2 sAAT3 ADA1 ADA2 ADH 1 11 11 11 0 11 32 2 21 11 21 11 11 12
NonLumped
data file:NumIndivs 2 NumLoci 6 Digits 1 Format NonLumped LocusNames sAAT1 sAAT2 sAAT3 ADA1 ADA2 ADH 1 123 143 -1 -1 144 144 120 122 157 158 144 144 2 135 135 134 140 144 144 120 122 161 161 144 144
NumIndivs 2 NumLoci 9 Digits 1 Format Lumped LocusNames m1 m2 m3 m4 A1 A2 A3 A4 A5 1 11 12 13 11 + + + - + 2 22 33 11 22 - - 0 - - 3 12 13 13 11 + - - - +
Anderson, E.C. and Thompson, E.A. (2002) A model-based method for identifying species hybrids using multilocus genetic data. Genetics 160: 1217-1229.